Patogeni degli agrumi

Below we have listed some pathogens of Citrus. You can observe some characteristics related to pathogens: isolation host, country of origin and symptoms. In the left column, under the heading “GBrowse”, for each isolate, were included to the application link to GBrowse, a useful tool for visualization and data processing. In the second column, the other hand, under the heading “NCBI accession no.”, there are links link to files of entire genomes on database “Nucleotide” from NCBI (National Center for Biotechnology Information).

Citrus tristeza virus (CTV)
GBrowse NCBI Accession no. Isolation host Country of origin Symptoms
         
VT U56902 Citrus sp. Israel
NuaGA AB046398 Unknown Japan Seedling Yellow
CT11A JQ911664 C. sinensis China
T318A DQ151548 Unknown Spain
AT-1 JQ061137 C. sinensis China
FL202 KC517493 C. sinensis Florida
FS2-2 EU937519 C. sinensis cv. Hamlin Israel
FS701 KC517494 C. reticulata Florida
FS703 KC517492 C. reticulata Florida
L192GR KC262793 Lemon Greece
Kpg3 HM573451 C. reticulata Blanco India
SG29 KC748392 C. sinensis cv. Sanguinello Italy
Mac39 - - Italy
P3R1 - - Italy
P3R3 - - Italy
T30 AF260651 Unknown Florida
FS701-T30 KC517489 C. reticulata Florida
FL278 KC517490 C. paradisi Florida
FS703-T30 KC517491 C. reticulata Florida
Bau282 KC748391 C. sinensis cv.TDV Italy
T385 Y18420 Unknown Spain
Qaha AY340974 Unknown Egypt
FS674 KC517485 C. sinensis Florida
FS701-T36 KC517486 C. reticulata Florida
FS703-T36 KC517487 C. reticulata Florida
T36QD CTU16304 Unknown Florida Quick Decline
CTV DQ272579 Unknown Mexico Stem pitting, Quick Decline
T36 U16304 Unknown Florida Quick Decline
FS577 KC517488 C. macrophylla Florida
B301 JF957196 C. sinensis Puertorico
NZRB-TH30 FJ525434 Poncirus trifoliata New Zealand
NZRB-M17 FJ525435 C. aurantifolia New Zealand
PUM/SP/T1 JX266712 C. grandis L. Osbeck Taiwan Stem pitting
NZRB-G90 FJ525432 Poncirus trifoliata New Zealand
NZRB-M12 FJ525431 Poncirus trifoliata New Zealand
NZ-RB-TH28 FJ525433 Poncirus trifoliata New Zealand
HA18-9 GQ454869 Unknown Hawaii
B165 EU076703 C. reticulata cv. Ellendale India
CT14A JQ911663 C. sinensis China
T68-1 JQ965169 C. macrophylla Florida
NZ-B18 FJ525436 C. sinensis New Zealand
12-8 KC333868 Citrus aurantifolia; mexican lime South Africa
T3 KC525952 C. macrophylla Florida
NZ-M16 EU857538 C. aurantifolia New Zealand
A18 JQ798289 C. reticulata Thailand Stem pitting
SY568 AF001623 Unknown California Stem pitting
PUM/M/T5 JX266713 C. grandis Taiwan
HA16-5 GQ454870 C. latifolia Hawaii

Citrus viroids

GBrowse NCBI Accession no.
   
Citrus viroid-I-LSS NC_004358
Citrus bent leaf viroid variant MC AB054637
Citrus bent leaf viroid isolate CBLVd-3 JQ080281
Citrus bent leaf viroid isolate CBLVd-2 JQ080280
Citrus bent leaf viroid NC_001651
Citrus dwarfing viroid isolate 961-7 EU934032
Citrus dwarfing viroid isolate E822 EU934031
citrus exocortis viroid CEV, CEV D-92 S67442
Citrus exocortis viroid variant MA AB054599
CEV Citrus exocortis viroid J02053
Hop stunt viroid variant KS14 AB211243
Hop stunt viroid variant EX1 AB211242
Citrus viroid II isolate CVd II HN-03 EU131156
Citrus viroid II isolate CVd II HN-02 EU131155
Citrus viroid II isolate CVd II HN-01 EU131154
Citrus viroid III isolate CVd III HN-03 EU131159
Citrus viroid III isolate CVd III HN-02 EU131158
Citrus viroid III isolate CVd III HN-01 EU131157
Citrus viroid IV virus NC_003539
Citrus Viroid IV (CVd IV) X14638
Citrus viroid IV virus NC_003539
Citrus viroid V NC_010165
Citrus viroid V from Citrus limon JQ072089